{"id":551,"date":"2018-05-08T22:07:37","date_gmt":"2018-05-08T13:07:37","guid":{"rendered":"http:\/\/www.ecobioinfo.com\/?p=551"},"modified":"2022-06-05T22:45:30","modified_gmt":"2022-06-05T13:45:30","slug":"ai%e8%aa%b2%e9%a1%8c1%ef%bc%9adna%e7%9b%b8%e5%90%8c%e6%80%a7%e6%a4%9c%e7%b4%a2%e3%81%a8ai3-16srdna%e5%a1%a9%e5%9f%ba%e9%85%8d%e5%88%97%e3%81%a7%e7%b4%b0%e8%8f%8c%e5%88%86%e9%a1%9e2","status":"publish","type":"post","link":"https:\/\/www.ecobioinfo.com\/?p=551","title":{"rendered":"AI\u8ab2\u984c1\uff1aDNA\u76f8\u540c\u6027\u691c\u7d22\u3068AI(3) 16SrDNA\u5869\u57fa\u914d\u5217\u3067\u7d30\u83cc\u5206\u985e(2)"},"content":{"rendered":"

\uff08\u300cDNA\u76f8\u540c\u6027\u691c\u7d22\u3068AI(2) 16SrDNA\u5869\u57fa\u914d\u5217\u3067\u7d30\u83cc\u5206\u985e<\/a>\u300d\u306e\u7d9a\u304d\u3067\u3059\u3002\uff09<\/p>\n

\u5168\u7d50\u5408\u3067\u5358\u7d14\u306b\u968e\u5c64\u3092\u5897\u3084\u3059\u65b9\u6cd5\u3067\u3069\u306e\u7a0b\u5ea6\u307e\u3067\u7cbe\u5ea6\u3092\u4e0a\u3052\u3089\u308c\u308b\u304b\u8a66\u3057\u3066\u307f\u307e\u3057\u305f\u3002<\/p>\n

\u57fa\u672c\u7684\u306a\u30d1\u30e9\u30e1\u30fc\u30bf\u306f\u524d\u56de\u3068\u540c\u3058\u3067\u3001\u4ee5\u4e0b\u306e\u6761\u4ef6\u3067\u30c6\u30b9\u30c8\u3057\u307e\u3057\u305f\u3002
\n\u2460\u5404\u5c5e\u306e\u30c7\u30fc\u30bf\u306f600\u4ef6\u7a0b\u5ea6
\nMNIST\uff08\u624b\u66f8\u304d\u6570\u5b57\u306e\u5224\u5225\uff09\u3067\u306f\u3001\u4e00\u6587\u5b57\u306b\u3064\u3044\u3066\u306e\u5b66\u7fd2\u30c7\u30fc\u30bf\u306f 5000\u4ef6\u7a0b\u5ea6\u3042\u308b\u3088\u3046\u3067\u3059\u3002
\n\u4eca\u56de\u306e16SrDNA\u30c7\u30fc\u30bf\u3067\u306f\u3001\uff11\u3064\u306e\u5c5e\u3067600\u4ef6\u7a0b\u5ea6\u306a\u306e\u3067\u30c7\u30fc\u30bf\u4e0d\u8db3\u3067\u9ad8\u3044\u7cbe\u5ea6\u306f\u671b\u3081\u307e\u305b\u3093\u304c\u3001
\n\u5168\u7d50\u5408\u3067\u30cd\u30c3\u30c8\u30ef\u30fc\u30af\u69cb\u6210\u3092\u5909\u3048\u3066\u3069\u306e\u7a0b\u5ea6\u307e\u3067\u4e0a\u3052\u3089\u308c\u308b\u304b\u8a66\u3057\u3066\u307f\u307e\u3057\u305f\u3002
\n\u2461epoch(\u2252\u5b66\u7fd2\u56de\u6570)\u306f\u300120\uff5e100 \u7a0b\u5ea6
\n\u4f8b\uff09
\nmodel.fit(traindna, trainans, n_epoch=50, batch_size=100, …
\n\u2462\u6c4e\u5316\u3092\u8003\u616e\u3057\u306a\u3044\uff08\u6c4e\u5316\u95a2\u6570\u3092\u8aad\u3093\u3067\u3044\u306a\u3044\uff09
\n\u6c4e\u5316\u306b\u3064\u3044\u3066\u306f\u5f8c\u3067\u8003\u616e\u3057\u307e\u3059\u3002
\n\u2463\u540c\u3058\u30ce\u30fc\u30c9\u6570\u3068\u6d3b\u6027\u5316\u95a2\u6570\u3067\u5358\u7d14\u306b\u5c64\u3092\u5897\u3084\u3059
\n\u4f8b\uff09
\nnet = tfl.fully_connected(net, 4096, activation=’relu’)
\nnet = tfl.fully_connected(net, 4096, activation=’relu’)
\n\u30fb\u30fb\u30fb\u30fb<\/p>\n

\uff08\uff11\uff09\u5168\u7d50\u5408 \u30ce\u30fc\u30c9=1024\u3001\u6d3b\u6027\u5316\u95a2\u6570=ReLU \u3067\u5c64\u3092\u5897\u3084\u3059<\/p>\n

\u5c64\u3000\u3000\u3000\u7cbe\u5ea6
\n\uff11\u3000\u3000\u30000.0001
\n\uff12\u3000\u3000\u30000.0
\n\uff14\u3000\u3000\u30000.5292
\n\uff16\u3000\u3000\u30000.0989
\n\uff08epoch=20\uff09<\/p>\n

\uff14\u5c64\u3067\u7cbe\u5ea6\u306f\u4e0a\u304c\u3063\u305f\u306e\u3067\u3059\u304c\u3001\uff16\u5c64\u3067\u306f\u4e0b\u304c\u3063\u3066\u3057\u307e\u3044\u307e\u3057\u305f\u3002
\n\u30d1\u30e9\u30e1\u30fc\u30bf\u306e epoch \u3092 50 \u306b\u5897\u3084\u3057\u3066\u307f\u307e\u3057\u305f\u3002<\/p>\n

\u5c64\u3000\u3000\u3000\u7cbe\u5ea6
\n\uff16\u3000\u3000\u30000.7403
\n\uff18\u3000\u3000\u30000.0009
\n\uff08epoch=50\uff09<\/p>\n

\uff16\u5c64\u3067 epoch \u3092\u5897\u3084\u3059\u3068\u7cbe\u5ea6\u304c\u4e0a\u304c\u308a\u307e\u3057\u305f\u304c\u3001\uff18\u5c64\u3067\u306f\u4e0b\u304c\u3063\u3066\u3057\u307e\u3044\u307e\u3057\u305f\u3002
\nepoch \u3092 100 \u306b\u5897\u3084\u3057\u3066\u307f\u307e\u3057\u305f\u3002<\/p>\n

\u5c64\u3000\u3000\u3000\u7cbe\u5ea6
\n\uff16\u3000\u3000\u30000.6997
\n\uff18\u3000\u3000\u30000.0009
\n\uff08epoch=100\uff09<\/p>\n

\u3053\u306e\u7a0b\u5ea6\u3067\u9650\u754c\u3067\u3057\u3087\u3046\u304b\uff1f<\/p>\n

\u6b21\u306f\u30ce\u30fc\u30c9\u6570\u30924096\u306b\u3057\u3066\u5c64\u3092\u5897\u3084\u3057\u3066\u307f\u307e\u3057\u305f\u3002<\/p>\n

\uff08\uff12\uff09\u5168\u7d50\u5408 \u30ce\u30fc\u30c9=4096\u3001\u6d3b\u6027\u5316\u95a2\u6570=ReLU \u3067\u5c64\u3092\u5897\u3084\u3059<\/p>\n

\u5c64\u3000\u3000\u3000\u7cbe\u5ea6
\n\uff11\u3000\u3000\u30000.0309
\n\uff12\u3000\u3000\u30000.726
\n\uff13\u3000\u3000\u30000.8056
\n\uff14\u3000\u3000\u30000.7877
\n\uff08epoch=20\uff09<\/p>\n

\u5c64\u3092\u5897\u3084\u3059\u3068\u7cbe\u5ea6\u306f\u4e0a\u304c\u308b\u306e\u3067\u3059\u304c\u3001\uff13\u5c64\u304c\u6700\u9ad8\u3067\uff14\u5c64\u3067\u306f\u7cbe\u5ea6\u304c\u4e0a\u304c\u3063\u3066\u3044\u307e\u305b\u3093\u3002
\n\u5b66\u7fd2\u30d1\u30e9\u30e1\u30fc\u30bf\u306e epoch\uff08\u2252\u5b66\u7fd2\u56de\u6570\uff09\u3092 50 \u306b\u5897\u3084\u3057\u3066\u307f\u307e\u3057\u305f\u3002<\/p>\n

\u5c64\u3000\u3000\u3000\u7cbe\u5ea6
\n\uff14\u3000\u3000\u30000.964
\n\uff15\u3000\u3000\u30000.952
\n\uff08epoch=50\uff09<\/p>\n

\u7cbe\u5ea6\u304c 0.96 \u7a0b\u5ea6\u306b\u4e0a\u304c\u308a\u307e\u3057\u305f\u3002
\n\uff14\u5c64\u3068\uff15\u5c64\u3067\u306f\u3042\u307e\u308a\u5909\u5316\u304c\u3042\u308a\u307e\u305b\u3093\u3002<\/p>\n

\uff15\u5c64\u306e epoch \u3092 100 \u306b\u5897\u3084\u3057\u3066\u307f\u307e\u3057\u305f\u3002<\/p>\n

\u5c64\u3000\u3000\u3000\u7cbe\u5ea6
\n\uff15\u3000\u3000\u30000.9618
\n\uff08epoch=100\uff09<\/p>\n

\uff15\u5c64\u306f\uff14\u5c64 epoch=50 \u306b\u6bd4\u3079\u3066\u3042\u307e\u308a\u5909\u308f\u308a\u307e\u305b\u3093\u3067\u3057\u305f\u3002
\n\u5358\u7d14\u306b\u968e\u5c64\u3092\u5897\u3084\u3059\u65b9\u6cd5\u3067\u306f\u3053\u306e\u8fba\u304c\u9650\u754c\u3067\u3057\u3087\u3046\u304b\uff1f
\n\u4eca\u56de\u306e\u30c6\u30b9\u30c8\u306e\u7bc4\u56f2\u3067\u7d50\u679c\u6700\u5927\u306f\u3001
\n\u5168\u7d50\u5408\u3001\u30ce\u30fc\u30c9\u6570=4096\u3001\uff14\u5c64\u3001epoch=50\u3067\u3001\u7cbe\u5ea6\u30000.964 \u3067\u3057\u305f\u3002
\n\u4eca\u5f8c\u306e\u691c\u8a0e\u4e8b\u9805\u306b\u306f\u3001
\n\u2460\u5b66\u7fd2\u30c7\u30fc\u30bf
\n\u30fb\u5b66\u7fd2\u30c7\u30fc\u30bf\u306e\u4ef6\u6570\u3092\u5897\u3084\u3059\u3002
\n\u30fb\u5b66\u7fd2\u30c7\u30fc\u30bf\u306e\u5869\u57fa\u914d\u5217\u53ef\u5909\u9577\u306b\u3059\u308b\u3002\uff08\u4eca\u56de\u306f\u30011024\u56fa\u5b9a\u9577\u3002\uff09
\n\u30fb\uff24\uff2e\uff21\u306e\u5185\u90e8\u8868\u73fe\u3092\u5909\u3048\u308b\u3002\uff08\u4eca\u56de\u306f\u3001\u6d6e\u52d5\u5c0f\u6570\u70b9\u578b A=1,T=3,C=7,G=9 \u306b\u5272\u308a\u632f\u3063\u3066\u3044\u308b\u3002\uff09
\n\u2461\u30cd\u30c3\u30c8\u30ef\u30fc\u30af\u69cb\u6210\u30fb\u5b66\u7fd2\u65b9\u5f0f
\n\u30fb\u7573\u8fbc\u30cb\u30e5\u30fc\u30e9\u30eb\u30cd\u30c3\u30c8\u30ef\u30fc\u30af\u3084\u518d\u5e30\u578b\u30cb\u30e5\u30fc\u30e9\u30eb\u30cd\u30c3\u30c8\u30ef\u30fc\u30af\u3092\u8a66\u3057\u3066\u307f\u308b\u3002
\n\u30fb\u5404\u5b66\u7fd2\u30d1\u30e9\u30e1\u30fc\u30bf\u3092\u691c\u8a0e\u3059\u308b\u3002
\n\u306a\u3069\u304c\u3042\u308a\u307e\u3059\u3002<\/p>\n

\u3053\u306e\u30c6\u30b9\u30c8\u3092\u4f8b\u3048\u3066\u8a00\u3046\u306a\u3089\u300c\u5148\u751f\u306e\u8b1b\u7fa9\u3092\u3088\u304f\u805e\u3044\u3066\u30c6\u30b9\u30c8\u3067\uff19\uff16\u70b9\u3068\u3063\u305f\u5b66\u751f\u300d\u3067\u3059\u3002
\n\u5b66\u751f\u3068\u3057\u3066\u306f\u512a\u79c0\u306a\u306e\u3067\u3059\u304c\u5fdc\u7528\u5206\u91ce\u3067\u306e\u5b9f\u52d9\u3067\u306f\u307e\u3060\u307e\u3060\u30d2\u30e8\u30b3\u3067\u3059\u3002
\n\u5b9f\u52d9\u3067\u4f7f\u3048\u308b\u3088\u3046\u306b\u306a\u308b\u307e\u3067\u306b\u306f\u3001\u307e\u3060\u307e\u3060\u8a13\u7df4\u30fb\u5b66\u7fd2\u304c\u5fc5\u8981\u3067\u3059\u3002
\n(S.Onda 2018\/5\/08)<\/p>\n

 <\/p>\n

 <\/p>\n

 <\/p>\n","protected":false},"excerpt":{"rendered":"\uff08\u300cDNA\u76f8\u540c\u6027\u691c\u7d22\u3068AI(2) 16SrDNA\u5869\u57fa\u914d\u5217\u3067\u7d30\u83cc\u5206\u985e\u300d\u306e\u7d9a\u304d\u3067\u3059\u3002\uff09 \u5168\u7d50\u5408\u3067\u5358\u7d14\u306b\u968e\u5c64\u3092\u5897\u3084\u3059\u65b9\u6cd5\u3067\u3069\u306e\u7a0b\u5ea6\u307e\u3067\u7cbe\u5ea6\u3092\u4e0a\u3052\u3089\u308c\u308b\u304b\u8a66\u3057\u3066\u307f\u307e\u3057\u305f\u3002 \u57fa\u672c\u7684\u306a\u30d1\u30e9\u30e1\u30fc\u30bf\u306f\u524d\u56de\u3068\u540c\u3058\u3067\u3001\u4ee5\u4e0b\u306e\u6761\u4ef6\u3067\u30c6\u30b9\u30c8\u3057\u307e …","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[7],"tags":[],"class_list":["post-551","post","type-post","status-publish","format-standard","hentry","category-ai_ecobio"],"_links":{"self":[{"href":"https:\/\/www.ecobioinfo.com\/index.php?rest_route=\/wp\/v2\/posts\/551","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ecobioinfo.com\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.ecobioinfo.com\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.ecobioinfo.com\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ecobioinfo.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=551"}],"version-history":[{"count":8,"href":"https:\/\/www.ecobioinfo.com\/index.php?rest_route=\/wp\/v2\/posts\/551\/revisions"}],"predecessor-version":[{"id":1483,"href":"https:\/\/www.ecobioinfo.com\/index.php?rest_route=\/wp\/v2\/posts\/551\/revisions\/1483"}],"wp:attachment":[{"href":"https:\/\/www.ecobioinfo.com\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=551"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.ecobioinfo.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=551"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.ecobioinfo.com\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=551"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}